analyzing-bootkit-and-rootkit-samples

What this skill does

# Analyzing Bootkit and Rootkit Samples

## When to Use

- A system shows signs of compromise that persist through OS reinstallation
- Antivirus and EDR are unable to detect malware despite clear evidence of compromise
- UEFI Secure Boot has been disabled or shows integrity violations
- Memory forensics reveals rootkit behavior (hidden processes, hooked system calls)
- Investigating nation-state level threats known to deploy bootkits (APT28, APT41, Equation Group)

**Do not use** for standard user-mode malware; bootkits and rootkits operate at a fundamentally different level requiring specialized analysis techniques.

## Prerequisites

- Disk imaging tools (dd, FTK Imager) for acquiring MBR/VBR sectors
- UEFITool for UEFI firmware volume analysis and module extraction
- chipsec for hardware-level firmware security assessment
- Ghidra with x86 real-mode and 16-bit support for MBR code analysis
- Volatility 3 for kernel-level rootkit artifact detection
- Bootable Linux live USB for offline system analysis

## Workflow

### Step 1: Acquire Boot Sectors and Firmware

Extract MBR, VBR, and UEFI firmware for offline analysis:

```bash
# Acquire MBR (first 512 bytes of disk)
dd if=/dev/sda of=mbr.bin bs=512 count=1

# Acquire first track (usually contains bootkit code beyond MBR)
dd if=/dev/sda of=first_track.bin bs=512 count=63

# Acquire VBR (Volume Boot Record - first sector of partition)
dd if=/dev/sda1 of=vbr.bin bs=512 count=1

# Acquire UEFI System Partition
mkdir /mnt/efi
mount /dev/sda1 /mnt/efi
cp -r /mnt/efi/EFI /analysis/efi_backup/

# Dump UEFI firmware (requires chipsec or flashrom)
# Using chipsec:
python chipsec_util.py spi dump firmware.rom

# Using flashrom:
flashrom -p internal -r firmware.rom

# Verify firmware dump integrity
sha256sum firmware.rom
```

### Step 2: Analyze MBR/VBR for Bootkit Code

Examine boot sector code for malicious modifications:

```bash
# Disassemble MBR code (16-bit real mode)
ndisasm -b16 mbr.bin > mbr_disasm.txt

# Compare MBR with known-good Windows MBR
# Standard Windows MBR begins with: EB 5A 90 (JMP 0x5C, NOP)
# Standard Windows 10 MBR: 33 C0 8E D0 BC 00 7C (XOR AX,AX; MOV SS,AX; MOV SP,7C00h)

python3 << 'PYEOF'
with open("mbr.bin", "rb") as f:
    mbr = f.read()

# Check MBR signature (bytes 510-511 should be 0x55AA)
if mbr[510:512] == b'\x55\xAA':
    print("[*] Valid MBR signature (0x55AA)")
else:
    print("[!] Invalid MBR signature")

# Check for known bootkit signatures
bootkit_sigs = {
    b'\xE8\x00\x00\x5E\x81\xEE': "TDL4/Alureon bootkit",
    b'\xFA\x33\xC0\x8E\xD0\xBC\x00\x7C\x8B\xF4\x50\x07': "Standard Windows MBR (clean)",
    b'\xEB\x5A\x90\x4E\x54\x46\x53': "Standard NTFS VBR (clean)",
}

for sig, name in bootkit_sigs.items():
    if sig in mbr:
        print(f"[{'!' if 'clean' not in name else '*'}] Signature match: {name}")

# Check partition table entries
print("\nPartition Table:")
for i in range(4):
    offset = 446 + (i * 16)
    entry = mbr[offset:offset+16]
    if entry != b'\x00' * 16:
        boot_flag = "Active" if entry[0] == 0x80 else "Inactive"
        part_type = entry[4]
        start_lba = int.from_bytes(entry[8:12], 'little')
        size_lba = int.from_bytes(entry[12:16], 'little')
        print(f"  Partition {i+1}: Type=0x{part_type:02X} {boot_flag} Start=LBA {start_lba} Size={size_lba} sectors")
PYEOF
```

### Step 3: Analyze UEFI Firmware for Implants

Inspect UEFI firmware volumes for unauthorized modules:

```bash
# Extract UEFI firmware components with UEFITool
# GUI: Open firmware.rom -> Inspect firmware volumes
# CLI:
UEFIExtract firmware.rom all

# List all DXE drivers (most common target for UEFI implants)
find firmware.rom.dump -name "*.efi" -exec file {} \;

# Compare against known-good firmware module list
# Each UEFI module has a GUID - compare against vendor baseline

# Verify Secure Boot configuration
python chipsec_main.py -m common.secureboot.variables

# Check SPI flash write protection
python chipsec_main.py -m common.bios_wp

# Check for known UEFI malware patterns
yara -r uefi_malware.yar firmware.rom
```

```
Known UEFI Bootkit Detection Points:
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
LoJax (APT28):
  - Modified SPI flash
  - Added DXE driver that drops agent to Windows
  - Persists through OS reinstall and disk replacement

BlackLotus:
  - Exploits CVE-2022-21894 to bypass Secure Boot
  - Modifies EFI System Partition bootloader
  - Installs kernel driver during boot

CosmicStrand:
  - Modifies CORE_DXE firmware module
  - Hooks kernel initialization during boot
  - Drops shellcode into Windows kernel memory

MoonBounce:
  - SPI flash implant in CORE_DXE module
  - Modified GetVariable() function
  - Deploys user-mode implant through boot chain

ESPecter:
  - Modifies Windows Boot Manager on ESP
  - Patches winload.efi to disable DSE
  - Loads unsigned kernel driver
```

### Step 4: Detect Kernel-Level Rootkit Behavior

Analyze the running system for rootkit artifacts:

```bash
# Memory forensics for rootkit detection
# SSDT hook detection
vol3 -f memory.dmp windows.ssdt | grep -v "ntoskrnl\|win32k"

# Hidden processes (DKOM)
vol3 -f memory.dmp windows.psscan > psscan.txt
vol3 -f memory.dmp windows.pslist > pslist.txt
# Diff to find hidden processes

# Kernel callback registration (rootkits register callbacks for filtering)
vol3 -f memory.dmp windows.callbacks

# Driver analysis
vol3 -f memory.dmp windows.driverscan
vol3 -f memory.dmp windows.modules

# Check for unsigned drivers
vol3 -f memory.dmp windows.driverscan | while read line; do
    driver_path=$(echo "$line" | awk '{print $NF}')
    if [ -f "$driver_path" ]; then
        sigcheck -nobanner "$driver_path" 2>/dev/null | grep "Unsigned"
    fi
done

# IDT hook detection
vol3 -f memory.dmp windows.idt
```

### Step 5: Boot Process Integrity Verification

Verify the integrity of the entire boot chain:

```bash
# Verify Windows Boot Manager signature
sigcheck -a C:\Windows\Boot\EFI\bootmgfw.efi

# Verify winload.efi
sigcheck -a C:\Windows\System32\winload.efi

# Verify ntoskrnl.exe
sigcheck -a C:\Windows\System32\ntoskrnl.exe

# Check Measured Boot logs (if TPM is available)
# Windows: BCDEdit /enum firmware
bcdedit /enum firmware

# Verify Secure Boot state
Confirm-SecureBootUEFI  # PowerShell cmdlet

# Check boot configuration for tampering
bcdedit /v

# Look for boot configuration changes
# testsigning: should be No
# nointegritychecks: should be No
# debug: should be No
bcdedit | findstr /i "testsigning nointegritychecks debug"
```

### Step 6: Document Bootkit/Rootkit Analysis

Compile comprehensive analysis findings:

```
Analysis should document:
- Boot sector (MBR/VBR) integrity status with hex comparison
- UEFI firmware module inventory and integrity verification
- Secure Boot status and any bypass mechanisms detected
- Kernel-level hooks (SSDT, IDT, IRP, inline) identified
- Hidden processes, drivers, and files discovered
- Persistence mechanism (SPI flash, ESP, MBR, kernel driver)
- Boot chain integrity verification results
- Attribution to known bootkit families if possible
- Remediation steps (reflash firmware, rebuild MBR, replace hardware)
```

## Key Concepts

| Term | Definition |
|------|------------|
| **Bootkit** | Malware that infects the boot process (MBR, VBR, UEFI) to execute before the operating system loads, gaining persistent low-level control |
| **MBR (Master Boot Record)** | First 512 bytes of a disk containing bootstrap code and partition table; MBR bootkits replace this code with malicious loaders |
| **UEFI (Unified Extensible Firmware Interface)** | Modern firmware interface replacing BIOS; UEFI bootkits implant malicious modules in firmware volumes or modify the ESP |
| **Secure Boot** | UEFI security feature verifying digital signatures of boot components; bootkits like BlackLotus exploit vulnerabilities to bypass it |
| **SPI Flash** | Flash memory chip storing UEFI firmware; advanced bootkits like LoJax and MoonBounce modify SPI flash for firmware-level pers