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humann-functional-profiler

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$97 forever

HUMAnN functional profiling skill for metagenomic pathway analysis

General

What this skill does


# HUMAnN Functional Profiler Skill

## Purpose
Provide HUMAnN functional profiling for metagenomic pathway analysis.

## Capabilities
- Gene family quantification
- MetaCyc pathway abundance
- UniRef annotation
- Stratified functional profiles
- Pathway coverage analysis
- Custom database integration

## Usage Guidelines
- Run taxonomic profiling first
- Quantify gene families and pathways
- Stratify by organism when relevant
- Analyze pathway coverage
- Compare functional profiles
- Document database versions

## Dependencies
- HUMAnN3
- eggNOG-mapper
- Prokka

## Process Integration
- Shotgun Metagenomics Pipeline (shotgun-metagenomics)

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