igv-genome-browser

Included with Lifetime

$97 forever

IGV integration skill for interactive genome visualization and review

Code Review

What this skill does


# IGV Genome Browser Skill

## Purpose
Enable IGV integration for interactive genome visualization and review.

## Capabilities
- BAM/VCF/BED visualization
- Batch screenshot generation
- Session management
- Track customization
- Region navigation
- Multi-sample comparison

## Usage Guidelines
- Load appropriate reference genome
- Configure tracks for analysis needs
- Generate batch screenshots for reports
- Save sessions for reproducibility
- Navigate to regions of interest
- Compare multiple samples visually

## Dependencies
- IGV
- IGV.js
- JBrowse2

## Process Integration
- Clinical Variant Interpretation (clinical-variant-interpretation)
- Tumor Molecular Profiling (tumor-molecular-profiling)
- Whole Genome Sequencing Pipeline (wgs-analysis-pipeline)

Files: 1

Size: 1.1 KB

Complexity: 8/100

Category: Code Review

Source: https://github.com/a5c-ai/babysitter/tree/main/library/specializations/domains/science/bioinformatics/skills/igv-genome-browser

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